omsim

Optical Map Simulator

See the OMSim manual to get started.

OMSim is described in:
Miclotte G, Plaisance S, Rombauts S, Van de Peer Y, Audenaert P, Fostier J. OMSim: a simulator for optical map data. Bioinformatics. 2017 Sep 1;33(17):2740-2742. doi: 10.1093/bioinformatics/btx293. PMID: 28472230; PMCID: PMC5860066.