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Make _recompile derived state computed from _changes

Status: Open.

#74 In RuleWorld/PyBioNetGen;

· wshlavacek opened on May 9, 2026

Pattern equality should normalize bond labels (or document the limitation)

Status: Open.

#73 In RuleWorld/PyBioNetGen;

· wshlavacek opened on May 9, 2026

Resolve BNG2.pl from $PATH via $BNGPATH env var

Status: Open.

#72 In RuleWorld/PyBioNetGen;

· wshlavacek opened on May 9, 2026

Action argument grammar fails on empty [] or {} literals

Status: Open.

#71 In RuleWorld/PyBioNetGen;

· wshlavacek opened on May 9, 2026

gdiff: copied subnodes aren't renamed/recolored after parent copy

Status: Open.

#70 In RuleWorld/PyBioNetGen;

· wshlavacek opened on May 9, 2026

Atomizer tests assert list.sort() == list.sort() (compares None == None)

Status: Open.

#69 In RuleWorld/PyBioNetGen;

· wshlavacek opened on May 7, 2026

BNGsim integration: in-process simulation, multi-format support, Python 3.12 fixes

Status: Open.

#66 In RuleWorld/PyBioNetGen;

· wshlavacek opened on Apr 6, 2026

Feature request: support for tfun (inline tabulated functions)

Status: Open.

#65 In RuleWorld/PyBioNetGen;

· wshlavacek opened on Mar 19, 2026

VS Code extension spawns bionetgen via PATH (ENOENT / wrong binary) instead of using selected interpreter

Status: Open.

#62 In RuleWorld/PyBioNetGen;

· wshlavacek opened on Mar 9, 2026

PyBioNetGen fails with setuptools ≥81 (Python 3.12)

Status: Open.

#61 In RuleWorld/PyBioNetGen;

· wshlavacek opened on Mar 9, 2026

Automated testing of PyPI releases

enhancementNew feature or requestNew feature or request

Status: Open.

#60 In RuleWorld/PyBioNetGen;

· jrfaeder opened on Apr 24, 2025

pkg_resources update breaks bngl

Status: Open.

#59 In RuleWorld/PyBioNetGen;

· luciansmith opened on Jul 15, 2024